Research Article
BibTex RIS Cite

Year 2020, Volume: 6 Issue: 3, 160 - 169, 16.05.2020

Mustafa Guzel M. Dilek Avsaroglu Yeşim Soyer

Abstract

References

  • Arcilla, M.S., van Hattem, J.M., Matamoros, S., Melles, D.C., Penders, J., de Jong, M.D., Schultsz, C. (2016). Dissemination of the mcr-1 colistin resistance gene. The Lancet Infectious Diseases, 16(2), 147-149. https://doi.org/10.1016/S1473-3099(15)00541-1
  • Borowiak, M., Fischer, J., Hammer, J.A., Hendriksen, R.S., Szabo, I., Malorny, B. (2017). Identification of a novel transposon-associated phosphoethanolamine transferase gene, mcr-5, conferring colistin resistance in d-tartrate fermenting Salmonella enterica subsp. enterica serovar Paratyphi B. Journal of Antimicrobial Chemotherapy, 72(12), 3317-3324. https://doi.org/10.1093/jac/dkx327
  • Carattoli, A., Villa, L., Feudi, C., Curcio, L., Orsini, S., Luppi, A., Pezzotti, G., Magistrali, C.F. (2017). Novel plasmid-mediated colistin resistance mcr-4 gene in Salmonella and Escherichia coli, Italy 2013, Spain and Belgium, 2015 to 2016. Eurosurveillance, 22(31), 30589. https://doi.org/10.2807/1560-7917.ES.2017.22.31.30589
  • Carroll, L.M., Gaballa, A., Guldimann, C., Sullivan, G., Henderson, L.O., Wiedmann, M. (2019). Identification of novel mobilized colistin resistance gene mcr-9 in a multidrug-resistant, colistin-susceptible Salmonella enterica serotype Typhimurium isolate. mBio, 10(3), e00853-19. https://doi.org/10.1128/mBio.00853-19
  • Centers for Disease Control and Prevention (CDC). (2013). Antibiotic resistance threats in the United States. http://www.cdc.gov/drugresistance/threat-report-2013/pdf/ar-threats-2013-508.pdf (accessed 11/21/2018).
  • Chen, K., Chan, E.W.C., Xe, M,. Ye, L., Dong, N., Chen, S. (2017). Widespread distribution of mcr-1-bearing bacteria in the ecosystem, 2015 to 2016. Eurosurveillance, 22(39), 17-00206. https://doi.org/10.2807/1560-7917.ES.2017.22.39.17-00206
  • Clinical and Laboratory Standards Institute (CLSI) (2014). Performance standards for antimicrobial susceptibility testing; Twenty-fourth informational supplement. CLSI document M100-S24. Clinical and Laboratory Standards Institute Wayne, PA.
  • Cui, M., Zhang, J., Zhang, C., Li, R., Chan, E.W., Wu, C., Wu, C., Chen, S. (2017). Distinct mechanisms of acquisition of mcr-1 -bearing plasmid by Salmonella strains recovered from animals and food samples. Scientific Reports, 7, 13199. https://doi.org/10.1038/s41598-017-01810-4
  • Doumith, M., Godbole, G.A., Philip, L., Lesley, D., Tim, D., Martin, D., Michaela, M-P., Berit, E., Matthew, J de P, Elizabeth, J., Alan, P.H., Katie, L.W. (2016). Detection of the plasmid-mediated mcr-1 gene conferring colistin resistance in human and food isolates of Salmonella enterica and Escherichia coli in England and Wales. Journal of Antimicrobial Chemotherapy, 71(8), 2300-2305. https://doi.org/10.1093/jac/dkw093
  • El Garch, F., Sauget, M., Hocquet, D., LeChaudee, D., Woehrle, F., Bertrand, X. (2017). mcr-1is borne by highly diverse Escherichia coli isolates since 2004 in food-producing animals in Europe. Clinical Microbiology and Infection, 23(1), 51.e1-51.e4. https://doi.org/10.1016/j.cmi.2016.08.033
  • European Committee on Antimicrobial Susceptibility Testing (EUCAST) (2016). Recomendations for MIC determination colistin (polymixin E) Eucast.org, http://www.eucast.org/fileadmin/src/media/PDFs/EUCAST_files/General_documents/Recommendations_for_MIC_determination_of_colistin_March_2016.pdf (accessed 29 March 2016).
  • Falgenhauer, L., Waezsada, S-E., Yao, Y., Imirzalioglu, C., Käsbohrer, A., Roesler, U., Michael, G.B., Schwarz, S., Werner, G., Kreienbrock, L., Chakraborty, T. (2016). Colistin resistance gene mcr-1 in extended-spectrum β-lactamase-producing and carbapenemase-producing Gram-negative bacteria in Germany. The Lancet Infectious Diseases, 16(3), 282-283. https://doi.org/10.1016/S1473-3099(16)00009-8
  • Feng, P., Weagant, S.D., Jinneman, K. (2011). BAM: diarrheagenic Escherichia coli. Silver Spring (MD), United States Food and Drug Administration. https://www.fda.gov/food/laboratory-methods-food/bam-diarrheagenic-escherichia-coli (accessed 11/21/2018).
  • Fernandes, M.R., McCulloch, J.A., Vianello, M.A., Moura, Q., Pérez-Chaparro, P.J., Esposito, F., Lincopan, N. (2016). First report of the globally disseminated IncX4 plasmid carrying the mcr-1 gene in a colistin-resistant Escherichia coli sequence type 101 isolate from a human infection in Brazil. Antimicrobial Agents and Chemotherapy, 60, 6415-6417. https://doi.org/10.1128/AAC.01325-16
  • García, V., García-Meniño, I., Mora, A., Flament-Simon, S.C., Díaz-Jiménez, D., Blanco, J.E., Blanco, J. (2018). Co-occurrence of mcr-1, mcr-4 and mcr-5 genes in multidrug-resistant ST10 Enterotoxigenic and Shiga toxin-producing Escherichia coli in Spain (2006-2017). International Journal of Antimicrobial Agents, 52(1), 104-108. https://doi.org/10.1016/j.ijantimicag.2018.03.022
  • Hasman, H., Hammerum, A.M., Hansen, F., Hendriksen, R.S., Olesen, B., Agerso, Y., Zankari, E., Leekitchharoenphon, P., Stegger, M., Kaas, R.S., Cavaco, L.M., Hansen D.S., Aarestrup, F.M., Skov, R.L. (2015). Detection of mcr-1 encoding plasmid mediated colistin resistant Escherischia coli isolates from human bloodstream infection and imported chicken meat, Denmark 2015. Eurosurveillance, 20(49), 1-5. https://doi.org/10.2807/1560-7917.ES.2015.20.49.30085
  • Hernández, M., Iglesias, M.R., Rodríguez-Lázaro, D., Gallardo, A., Quijada, N.M., Miguela-Villoldo, P., Campos, M.J., Píriz, S., López-Orozco, G., de Frutos, C,, Sáez, J.L., Ugarte-Ruiz, M., Domínguez, L., Quesada, A. (2017). Co-occurrence of colistin-resistance genes mcr-1 and mcr-3 among multidrug-resistant Escherichia coli isolated from cattle, Spain, September 2015. Eurosurveillance, 22(31), pii=30586. https://doi.org/10.2807/1560-7917.ES.2017.22.31.30586
  • Hu, Y., Liu, F., Lin, I.Y.C., Gao, G.F., Zhu, B. (2016). Dissemination of the mcr-1 colistin resistance gene. The Lancet Infectious Diseases, 16(2), 146-147. https://doi.org/10.1016/S1473-3099(15)00533-2
  • Kyere, E.O, Bulut, E., Avşaroğlu, M.D., Soyer, Y. (2015). Molecular evaluation and antimicrobial susceptibility testing of Escherichia coli isolates from food products in Turkey. Food Science and Biotechnology, 24(3), 1001-1009. https://doi.org/10.1007/s10068-015-0128-6
  • Li, A., Yang, Y., Miao, M., Chavda, K.D., Xie, X., Feng, P., Tang, Y. (2016). Complete sequences of mcr-1-Harboring plasmids from extended spectrum b-lactamase and carbapenemase producing Enterobacteriaceae. Antimicrobial Agents and Chemotherapy, 60(7), 4351-4354. https://doi.org/10.1128/AAC.00550-16
  • Li, X.P., Fang, L.X., Jiang, P., Pan, D., Xia, J., Liao, X.P., Sun, J. (2017). Emergence of the colistin resistance gene mcr-1 in Citrobacter freundii. International Journal of Antimicrobial Agents, 49(6), 786-787. https://doi.org/10.1016/j.ijantimicag.2017.04.004
  • Litrup, E., Kiil, K., Hammerum, A.M., Roer, L., Nielsen, E.M., Torpdahl, M. (2017). Plasmid-borne colistin resistance gene mcr-3 in Salmonella isolates from human infections, Denmark, 2009-17. Eurosurveillance, 22(31), pii=30587. https://doi.org/10.2807/1560-7917.ES.2017.22.31.30587
  • Liu, Y.-Y., Wang, Y., Walsh, T.R., Yi, L.X., Zhang, R., Spencer, J., Doi, Y., Tian, G., Dong, B., Huang, X., Yu, L.F., Gu, D., Ren, H., Chen, X., Lv, L., He, D., Zhou, H., Liang, Z., Liu, J.H., Shen, J. (2016). Emergence of plasmid-mediated colistin resistance mechanism mcr-1 in animals and human beings in China: a microbiological and molecular biological study. The Lancet Infectious Diseases, 16(2), 161-168. https://doi.org/10.1016/S1473-3099(15)00424-7
  • Malhotra-Kumar, S., Xavier, B.B., Das A.J., Lammens, C., Butaye, P., Goossens, H. (2016). Colistin resistance gene mcr-1 harboured on a multidrug resistant plasmid. The Lancet Infectious Diseases, 16(3), 283-284. https://doi.org/10.1016/S1473-3099(16)00012-8
  • McGann P, Snesrud E, Maybank R, Corey B, Ong AC, Clifford R, Hinkle M, Whitman T, Lesho E, Schaecher KE. (2016). Escherichia coli harboring mcr-1 and blaCTX-M on a novel IncF plasmid: First report of mcr-1 in the USA. Antimicrobial agents and Chemotherapy, 60(7), 4420-4421. https://doi.org/10.1128/AAC.01103-16
  • Mulvey, M.R., Matajese, L.F., Robertson, J., Nash, J.H.E., Boerlin, P., Toye, B., Irwin, R., Melano, R.G. (2016). Dissemination of the mcr-1 colistin resistance gene. The Lancet Infectious Diseases, 16(3), 289-290. https://doi.org/10.1016/S1473-3099(16)00067-0
  • Olaitan AO, Chabou S, Okdah L, Morand S, Rolain JM. (2016). Dissemination of the mcr-1 colistin resistance gene. The Lancet Infectious Diseases, 16(2), 147. https://doi.org/10.1016/S1473-3099(15)00540-X
  • Ordooei, J.A., Shokouhi, S., Sahraei, Z. (2015). A review on colistin nephrotoxicity. European Journal of Clinical Pharmacology, 71(7), 801-810. https://doi.org/10.1007/s00228-015-1865-4
  • Perrin-Guyomard, A., Bruneau, M., Houée, P., Deleurme, K., Legrandois, P., Poirier, C., Soumet, C., Sanders, P. (2016). Prevalence of mcr-1 in commensal Escherichia coli from French livestock, 2007 to 2014. Eurosurveillance, 21(6); pii=30135. https://doi.org/10.2807/1560-7917.ES.2016.21.6.30135
  • Prim, N., Rivera, A., Rodríguez-Navarro, J., Español, M., Turbau, M., Coll, P., Mirelis, B. (2016). Detection of mcr-1 colistin resistance gene in polyclonal Escherichia coli isolates in Barcelona, Spain, 2012 to 2015. Eurosurveillance, 21(13), pii=30183. https://doi.org/10.2807/1560-7917.ES.2016.21.13.30183
  • Rebelo, A.R., Bortolaia, V., Kjeldgaard, J.S., Pedersen, S.K., Leekitcharoenphon, P., Hansen, I.M., Battisti, A. (2018). Multiplex PCR for detection of plasmid-mediated colistin resistance determinants, mcr-1, mcr-2, mcr-3, mcr-4 and mcr-5 for surveillance purposes. Eurosurveillance, 23(6), pii=17-00672. https://doi.org/10.2807/1560-7917.ES.2018.23.6.17-00672
  • Roer, L., Hansen, F., Stegger, M., Sönksen, U.W., Hasman, H., Hammerum, A.M. (2017). Novel mcr-3 variant, encoding mobile colistin resistance, in an ST131 Escherichia coli isolate from bloodstream infection, Denmark, 2014. Eurosurveillance, 22(31), pii=30584. https://doi.org/10.2807/1560-7917.ES.2017.22.31.30584
  • Sennati, S., Di Pilato, V., Riccobono, E., Di Maggio, T., Villagran, A.L., Pallecchi, L., Giani, T. (2017). Citrobacter braakii carrying plasmid-borne mcr-1 colistin resistance gene from ready-to-eat food from a market in the Chaco region of Bolivia. Journal of Antimicrobial Chemotherapy, 72(7), 2127-2129. https://doi.org/10.1093/jac/dkx078
  • Sun, J., Li, X-P., Yang, R-S., Fang, L-X., Huo, W., Li, S-M., Liu, Y-H. (2016). Complete nucleotide sequence of inci2 plasmid co-harboring bla CTX-M-55 and mcr-1. Antimicrobial Agents and Chemotherapy, 60, AAC.00774-16. https://doi.org/10.1128/AAC.00774-16
  • Suzuki, S., Ohnishi, M., Kawanishi, M., Akiba, M., Kuroda, M. (2016). Investigation of a plasmid genome database for colistin-resistance gene mcr-1. The Lancet Infectious Diseases, 16(3), 284-285. https://doi.org/10.1016/S1473-3099(16)00008-6
  • Tang, Y., Dai, L., Sahin, O., Wu, Z., Liu, M., Zhang, Q. (2017). Emergence of a plasmid-borne multidrug resistance gene cfr (C) in foodborne pathogen Campylobacter. Journal of Antimicrobial Chemotherapy, 72(6), 1581-1588. https://doi.org/10.1093/jac/dkx023
  • Tse, H., Yuen, K.Y. (2016). Dissemination of the mcr-1 colistin resistance gene. The Lancet Infectious Diseases, 16(2), 145-146. https://doi.org/10.1016/S1473-3099(15)00532-0
  • Wang, R., Dorp, L., Shaw, L.P., Bradley, P., Wang, Q., Wang, X., Dorai-Schneiders, T. (2018a). The global distribution and spread of the mobilized colistin resistance gene mcr-1. Nature Communications, 9(1), 1179.https://doi.org/10.1 038/s41467-018-03205-z
  • Wang, X., Wang, Y., Zhou, Y., Li, J., Yin, W., Wang, S., Zhang, S., Shen, J., Wang Y. (2018b). Emergence of a novel mobile colistin resistance gene, mcr-8, in NDM-producing Klebsiella pneumonia. Emerging Microbes & Infections, 7(1), 1-9. https://doi.org/10.1038/s41426-018-0124-z
  • Webb, H.E., Granier, S.A., Marault, M., Millemann, Y., den Bakker, H.C., Nightingale, K.K., Loneragan, G.H. (2016). Dissemination of the mcr-1 colistin resistance gene. The Lancet Infectious Diseases, 16(2), 144-145. https://doi.org/10.1016/S1473-3099(15)00538-1
  • Xavier, B.B., Lammens, C., Ruhal, R., Kumar-Singh, S., Butaye, P., Goossens, H., Malhotra-Kumar, S. (2016). Identification of a novel plasmid-mediated colistin-resistance gene, mcr-2, in Escherichia coli, Belgium, June 2016. Eurosurveillance, 21(27), pii=30280. https://doi.org/10.2807/1560-7917.ES.2016.21.27.30280
  • Yang, Y.Q., Li, Y.X., Lei, C.W., Zhang, A,Y., Wang, H.N. (2018). Novel plasmid-mediated colistin resistance gene mcr-7.1 in Klebsiella pneumoniae. Journal of Antimicrobial Chemotherapy, 73(7), 1791-1795. https://doi.org/10.1093/jac/dky111
  • Yang, Y.Q., Zhang, A.Y., Ma, S,Z., Kong, L.H., Li, Y. X., Liu, J.X., Wang, H.N. (2016). Co-occurrence of mcr-1 and ESBL on a single plasmid in Salmonella enterica. Journal of Antimicrobial Chemotherapy, 71(8), 2336-2338.https://doi.org/10.1093/jac/dkw243
  • Yao, X., Doi, Y., Zeng, L., Lv, L., Liu, J.H. (2016). Carbapenem-resistant and colistin-resistant Escherichia coli co-producing NDM-9 and mcr-1. The Lancet Infectious Diseases, 16(3), 288-289. https://doi.org/10.1016/S1473-3099(16)00057-8
  • Ye, H., Li, Y., Li, Z., Gao, R., Zhang, H., Wen, R., Gao, G.F., Hu, Q., Feng, Y. (2016). Diversified mcr-1 harbouring plasmid reservoirs confer resistance to colistin in human gut microbiota. mBio, 7(2), e00177-16. https://doi.org/10.1128/mBio.00177-16
  • Yin, W., Li, H., Shen, Y., Liu, Z., Wang, S., Shen, Z., Wang, Y. (2017). Novel plasmid-mediated colistin resistance gene mcr-3 in Escherichia coli. mBio, 8(3), e00543-17. https://doi.org/10.1128/mBio.00543-17 Zeng, K-J., Doi, Y., Pati,l S., Huang, X., Tian, G-B. (2016). Emergence of the plasmid-mediated mcr-1 gene in colistin-resistant Enterobacter aerogenes and Enterobacter cloacae. Antimicrobial Agents Chemotherapy, 60, 3862-3863. https://doi.org/10.1128/AAC.00345-16
  • Zurfuh, K., Poirel, L., Nordmann, P. (2016). Occurrence of the plasmid-borne mcr-1 colistin resistance gene in ESBL-producing Enterobacteriaceae in river water and imported vegetable samples in Switzerland. Antimicrobial Agents and Chemotherapy, 60(4), 2594-2595. https://doi.org/10.1128/AAC.00066-16

Determination of colistin resistance in Escherichia coli isolates from foods in Turkey, 2011-2015

Year 2020, Volume: 6 Issue: 3, 160 - 169, 16.05.2020

Mustafa Guzel M. Dilek Avsaroglu Yeşim Soyer

Abstract

Antimicrobial resistance of pathogenic microorganisms is an emerging public health concern. Intensive use of antibiotics in food animals might increase antimicrobial resistance in foodborne pathogens. Colistin is a last resort antibiotic for treatment of multidrug resistant (MDR) Gram negative pathogens. The recent antimicrobial resistance studies revealed a mobile antimicrobial resistance gene (mcr) that provides resistance to colistin. Furthermore, the gene has been found in different genera. Therefore, the aim of this study was to determine colistin resistance of Escherichia coli isolates (N=48) isolated in between 2011 and 2015 from food samples in Turkey. In addition, 5 mcr genes and their variants were screened by performing PCR on resistant isolates. 4 E. coli isolates were found resistant to colistin above the epidemiological cut-off value (Minimum inhibitory concentration (MIC) > 2mg/L). None of the resistant isolates had the mcr genes. Further studies with human and food isolates should be conducted to figure out which gene or genes are responsible for colistin resistance.

Keywords

Antimicrobial resistance Colistin Escherichia coli,

References

  • Arcilla, M.S., van Hattem, J.M., Matamoros, S., Melles, D.C., Penders, J., de Jong, M.D., Schultsz, C. (2016). Dissemination of the mcr-1 colistin resistance gene. The Lancet Infectious Diseases, 16(2), 147-149. https://doi.org/10.1016/S1473-3099(15)00541-1
  • Borowiak, M., Fischer, J., Hammer, J.A., Hendriksen, R.S., Szabo, I., Malorny, B. (2017). Identification of a novel transposon-associated phosphoethanolamine transferase gene, mcr-5, conferring colistin resistance in d-tartrate fermenting Salmonella enterica subsp. enterica serovar Paratyphi B. Journal of Antimicrobial Chemotherapy, 72(12), 3317-3324. https://doi.org/10.1093/jac/dkx327
  • Carattoli, A., Villa, L., Feudi, C., Curcio, L., Orsini, S., Luppi, A., Pezzotti, G., Magistrali, C.F. (2017). Novel plasmid-mediated colistin resistance mcr-4 gene in Salmonella and Escherichia coli, Italy 2013, Spain and Belgium, 2015 to 2016. Eurosurveillance, 22(31), 30589. https://doi.org/10.2807/1560-7917.ES.2017.22.31.30589
  • Carroll, L.M., Gaballa, A., Guldimann, C., Sullivan, G., Henderson, L.O., Wiedmann, M. (2019). Identification of novel mobilized colistin resistance gene mcr-9 in a multidrug-resistant, colistin-susceptible Salmonella enterica serotype Typhimurium isolate. mBio, 10(3), e00853-19. https://doi.org/10.1128/mBio.00853-19
  • Centers for Disease Control and Prevention (CDC). (2013). Antibiotic resistance threats in the United States. http://www.cdc.gov/drugresistance/threat-report-2013/pdf/ar-threats-2013-508.pdf (accessed 11/21/2018).
  • Chen, K., Chan, E.W.C., Xe, M,. Ye, L., Dong, N., Chen, S. (2017). Widespread distribution of mcr-1-bearing bacteria in the ecosystem, 2015 to 2016. Eurosurveillance, 22(39), 17-00206. https://doi.org/10.2807/1560-7917.ES.2017.22.39.17-00206
  • Clinical and Laboratory Standards Institute (CLSI) (2014). Performance standards for antimicrobial susceptibility testing; Twenty-fourth informational supplement. CLSI document M100-S24. Clinical and Laboratory Standards Institute Wayne, PA.
  • Cui, M., Zhang, J., Zhang, C., Li, R., Chan, E.W., Wu, C., Wu, C., Chen, S. (2017). Distinct mechanisms of acquisition of mcr-1 -bearing plasmid by Salmonella strains recovered from animals and food samples. Scientific Reports, 7, 13199. https://doi.org/10.1038/s41598-017-01810-4
  • Doumith, M., Godbole, G.A., Philip, L., Lesley, D., Tim, D., Martin, D., Michaela, M-P., Berit, E., Matthew, J de P, Elizabeth, J., Alan, P.H., Katie, L.W. (2016). Detection of the plasmid-mediated mcr-1 gene conferring colistin resistance in human and food isolates of Salmonella enterica and Escherichia coli in England and Wales. Journal of Antimicrobial Chemotherapy, 71(8), 2300-2305. https://doi.org/10.1093/jac/dkw093
  • El Garch, F., Sauget, M., Hocquet, D., LeChaudee, D., Woehrle, F., Bertrand, X. (2017). mcr-1is borne by highly diverse Escherichia coli isolates since 2004 in food-producing animals in Europe. Clinical Microbiology and Infection, 23(1), 51.e1-51.e4. https://doi.org/10.1016/j.cmi.2016.08.033
  • European Committee on Antimicrobial Susceptibility Testing (EUCAST) (2016). Recomendations for MIC determination colistin (polymixin E) Eucast.org, http://www.eucast.org/fileadmin/src/media/PDFs/EUCAST_files/General_documents/Recommendations_for_MIC_determination_of_colistin_March_2016.pdf (accessed 29 March 2016).
  • Falgenhauer, L., Waezsada, S-E., Yao, Y., Imirzalioglu, C., Käsbohrer, A., Roesler, U., Michael, G.B., Schwarz, S., Werner, G., Kreienbrock, L., Chakraborty, T. (2016). Colistin resistance gene mcr-1 in extended-spectrum β-lactamase-producing and carbapenemase-producing Gram-negative bacteria in Germany. The Lancet Infectious Diseases, 16(3), 282-283. https://doi.org/10.1016/S1473-3099(16)00009-8
  • Feng, P., Weagant, S.D., Jinneman, K. (2011). BAM: diarrheagenic Escherichia coli. Silver Spring (MD), United States Food and Drug Administration. https://www.fda.gov/food/laboratory-methods-food/bam-diarrheagenic-escherichia-coli (accessed 11/21/2018).
  • Fernandes, M.R., McCulloch, J.A., Vianello, M.A., Moura, Q., Pérez-Chaparro, P.J., Esposito, F., Lincopan, N. (2016). First report of the globally disseminated IncX4 plasmid carrying the mcr-1 gene in a colistin-resistant Escherichia coli sequence type 101 isolate from a human infection in Brazil. Antimicrobial Agents and Chemotherapy, 60, 6415-6417. https://doi.org/10.1128/AAC.01325-16
  • García, V., García-Meniño, I., Mora, A., Flament-Simon, S.C., Díaz-Jiménez, D., Blanco, J.E., Blanco, J. (2018). Co-occurrence of mcr-1, mcr-4 and mcr-5 genes in multidrug-resistant ST10 Enterotoxigenic and Shiga toxin-producing Escherichia coli in Spain (2006-2017). International Journal of Antimicrobial Agents, 52(1), 104-108. https://doi.org/10.1016/j.ijantimicag.2018.03.022
  • Hasman, H., Hammerum, A.M., Hansen, F., Hendriksen, R.S., Olesen, B., Agerso, Y., Zankari, E., Leekitchharoenphon, P., Stegger, M., Kaas, R.S., Cavaco, L.M., Hansen D.S., Aarestrup, F.M., Skov, R.L. (2015). Detection of mcr-1 encoding plasmid mediated colistin resistant Escherischia coli isolates from human bloodstream infection and imported chicken meat, Denmark 2015. Eurosurveillance, 20(49), 1-5. https://doi.org/10.2807/1560-7917.ES.2015.20.49.30085
  • Hernández, M., Iglesias, M.R., Rodríguez-Lázaro, D., Gallardo, A., Quijada, N.M., Miguela-Villoldo, P., Campos, M.J., Píriz, S., López-Orozco, G., de Frutos, C,, Sáez, J.L., Ugarte-Ruiz, M., Domínguez, L., Quesada, A. (2017). Co-occurrence of colistin-resistance genes mcr-1 and mcr-3 among multidrug-resistant Escherichia coli isolated from cattle, Spain, September 2015. Eurosurveillance, 22(31), pii=30586. https://doi.org/10.2807/1560-7917.ES.2017.22.31.30586
  • Hu, Y., Liu, F., Lin, I.Y.C., Gao, G.F., Zhu, B. (2016). Dissemination of the mcr-1 colistin resistance gene. The Lancet Infectious Diseases, 16(2), 146-147. https://doi.org/10.1016/S1473-3099(15)00533-2
  • Kyere, E.O, Bulut, E., Avşaroğlu, M.D., Soyer, Y. (2015). Molecular evaluation and antimicrobial susceptibility testing of Escherichia coli isolates from food products in Turkey. Food Science and Biotechnology, 24(3), 1001-1009. https://doi.org/10.1007/s10068-015-0128-6
  • Li, A., Yang, Y., Miao, M., Chavda, K.D., Xie, X., Feng, P., Tang, Y. (2016). Complete sequences of mcr-1-Harboring plasmids from extended spectrum b-lactamase and carbapenemase producing Enterobacteriaceae. Antimicrobial Agents and Chemotherapy, 60(7), 4351-4354. https://doi.org/10.1128/AAC.00550-16
  • Li, X.P., Fang, L.X., Jiang, P., Pan, D., Xia, J., Liao, X.P., Sun, J. (2017). Emergence of the colistin resistance gene mcr-1 in Citrobacter freundii. International Journal of Antimicrobial Agents, 49(6), 786-787. https://doi.org/10.1016/j.ijantimicag.2017.04.004
  • Litrup, E., Kiil, K., Hammerum, A.M., Roer, L., Nielsen, E.M., Torpdahl, M. (2017). Plasmid-borne colistin resistance gene mcr-3 in Salmonella isolates from human infections, Denmark, 2009-17. Eurosurveillance, 22(31), pii=30587. https://doi.org/10.2807/1560-7917.ES.2017.22.31.30587
  • Liu, Y.-Y., Wang, Y., Walsh, T.R., Yi, L.X., Zhang, R., Spencer, J., Doi, Y., Tian, G., Dong, B., Huang, X., Yu, L.F., Gu, D., Ren, H., Chen, X., Lv, L., He, D., Zhou, H., Liang, Z., Liu, J.H., Shen, J. (2016). Emergence of plasmid-mediated colistin resistance mechanism mcr-1 in animals and human beings in China: a microbiological and molecular biological study. The Lancet Infectious Diseases, 16(2), 161-168. https://doi.org/10.1016/S1473-3099(15)00424-7
  • Malhotra-Kumar, S., Xavier, B.B., Das A.J., Lammens, C., Butaye, P., Goossens, H. (2016). Colistin resistance gene mcr-1 harboured on a multidrug resistant plasmid. The Lancet Infectious Diseases, 16(3), 283-284. https://doi.org/10.1016/S1473-3099(16)00012-8
  • McGann P, Snesrud E, Maybank R, Corey B, Ong AC, Clifford R, Hinkle M, Whitman T, Lesho E, Schaecher KE. (2016). Escherichia coli harboring mcr-1 and blaCTX-M on a novel IncF plasmid: First report of mcr-1 in the USA. Antimicrobial agents and Chemotherapy, 60(7), 4420-4421. https://doi.org/10.1128/AAC.01103-16
  • Mulvey, M.R., Matajese, L.F., Robertson, J., Nash, J.H.E., Boerlin, P., Toye, B., Irwin, R., Melano, R.G. (2016). Dissemination of the mcr-1 colistin resistance gene. The Lancet Infectious Diseases, 16(3), 289-290. https://doi.org/10.1016/S1473-3099(16)00067-0
  • Olaitan AO, Chabou S, Okdah L, Morand S, Rolain JM. (2016). Dissemination of the mcr-1 colistin resistance gene. The Lancet Infectious Diseases, 16(2), 147. https://doi.org/10.1016/S1473-3099(15)00540-X
  • Ordooei, J.A., Shokouhi, S., Sahraei, Z. (2015). A review on colistin nephrotoxicity. European Journal of Clinical Pharmacology, 71(7), 801-810. https://doi.org/10.1007/s00228-015-1865-4
  • Perrin-Guyomard, A., Bruneau, M., Houée, P., Deleurme, K., Legrandois, P., Poirier, C., Soumet, C., Sanders, P. (2016). Prevalence of mcr-1 in commensal Escherichia coli from French livestock, 2007 to 2014. Eurosurveillance, 21(6); pii=30135. https://doi.org/10.2807/1560-7917.ES.2016.21.6.30135
  • Prim, N., Rivera, A., Rodríguez-Navarro, J., Español, M., Turbau, M., Coll, P., Mirelis, B. (2016). Detection of mcr-1 colistin resistance gene in polyclonal Escherichia coli isolates in Barcelona, Spain, 2012 to 2015. Eurosurveillance, 21(13), pii=30183. https://doi.org/10.2807/1560-7917.ES.2016.21.13.30183
  • Rebelo, A.R., Bortolaia, V., Kjeldgaard, J.S., Pedersen, S.K., Leekitcharoenphon, P., Hansen, I.M., Battisti, A. (2018). Multiplex PCR for detection of plasmid-mediated colistin resistance determinants, mcr-1, mcr-2, mcr-3, mcr-4 and mcr-5 for surveillance purposes. Eurosurveillance, 23(6), pii=17-00672. https://doi.org/10.2807/1560-7917.ES.2018.23.6.17-00672
  • Roer, L., Hansen, F., Stegger, M., Sönksen, U.W., Hasman, H., Hammerum, A.M. (2017). Novel mcr-3 variant, encoding mobile colistin resistance, in an ST131 Escherichia coli isolate from bloodstream infection, Denmark, 2014. Eurosurveillance, 22(31), pii=30584. https://doi.org/10.2807/1560-7917.ES.2017.22.31.30584
  • Sennati, S., Di Pilato, V., Riccobono, E., Di Maggio, T., Villagran, A.L., Pallecchi, L., Giani, T. (2017). Citrobacter braakii carrying plasmid-borne mcr-1 colistin resistance gene from ready-to-eat food from a market in the Chaco region of Bolivia. Journal of Antimicrobial Chemotherapy, 72(7), 2127-2129. https://doi.org/10.1093/jac/dkx078
  • Sun, J., Li, X-P., Yang, R-S., Fang, L-X., Huo, W., Li, S-M., Liu, Y-H. (2016). Complete nucleotide sequence of inci2 plasmid co-harboring bla CTX-M-55 and mcr-1. Antimicrobial Agents and Chemotherapy, 60, AAC.00774-16. https://doi.org/10.1128/AAC.00774-16
  • Suzuki, S., Ohnishi, M., Kawanishi, M., Akiba, M., Kuroda, M. (2016). Investigation of a plasmid genome database for colistin-resistance gene mcr-1. The Lancet Infectious Diseases, 16(3), 284-285. https://doi.org/10.1016/S1473-3099(16)00008-6
  • Tang, Y., Dai, L., Sahin, O., Wu, Z., Liu, M., Zhang, Q. (2017). Emergence of a plasmid-borne multidrug resistance gene cfr (C) in foodborne pathogen Campylobacter. Journal of Antimicrobial Chemotherapy, 72(6), 1581-1588. https://doi.org/10.1093/jac/dkx023
  • Tse, H., Yuen, K.Y. (2016). Dissemination of the mcr-1 colistin resistance gene. The Lancet Infectious Diseases, 16(2), 145-146. https://doi.org/10.1016/S1473-3099(15)00532-0
  • Wang, R., Dorp, L., Shaw, L.P., Bradley, P., Wang, Q., Wang, X., Dorai-Schneiders, T. (2018a). The global distribution and spread of the mobilized colistin resistance gene mcr-1. Nature Communications, 9(1), 1179.https://doi.org/10.1 038/s41467-018-03205-z
  • Wang, X., Wang, Y., Zhou, Y., Li, J., Yin, W., Wang, S., Zhang, S., Shen, J., Wang Y. (2018b). Emergence of a novel mobile colistin resistance gene, mcr-8, in NDM-producing Klebsiella pneumonia. Emerging Microbes & Infections, 7(1), 1-9. https://doi.org/10.1038/s41426-018-0124-z
  • Webb, H.E., Granier, S.A., Marault, M., Millemann, Y., den Bakker, H.C., Nightingale, K.K., Loneragan, G.H. (2016). Dissemination of the mcr-1 colistin resistance gene. The Lancet Infectious Diseases, 16(2), 144-145. https://doi.org/10.1016/S1473-3099(15)00538-1
  • Xavier, B.B., Lammens, C., Ruhal, R., Kumar-Singh, S., Butaye, P., Goossens, H., Malhotra-Kumar, S. (2016). Identification of a novel plasmid-mediated colistin-resistance gene, mcr-2, in Escherichia coli, Belgium, June 2016. Eurosurveillance, 21(27), pii=30280. https://doi.org/10.2807/1560-7917.ES.2016.21.27.30280
  • Yang, Y.Q., Li, Y.X., Lei, C.W., Zhang, A,Y., Wang, H.N. (2018). Novel plasmid-mediated colistin resistance gene mcr-7.1 in Klebsiella pneumoniae. Journal of Antimicrobial Chemotherapy, 73(7), 1791-1795. https://doi.org/10.1093/jac/dky111
  • Yang, Y.Q., Zhang, A.Y., Ma, S,Z., Kong, L.H., Li, Y. X., Liu, J.X., Wang, H.N. (2016). Co-occurrence of mcr-1 and ESBL on a single plasmid in Salmonella enterica. Journal of Antimicrobial Chemotherapy, 71(8), 2336-2338.https://doi.org/10.1093/jac/dkw243
  • Yao, X., Doi, Y., Zeng, L., Lv, L., Liu, J.H. (2016). Carbapenem-resistant and colistin-resistant Escherichia coli co-producing NDM-9 and mcr-1. The Lancet Infectious Diseases, 16(3), 288-289. https://doi.org/10.1016/S1473-3099(16)00057-8
  • Ye, H., Li, Y., Li, Z., Gao, R., Zhang, H., Wen, R., Gao, G.F., Hu, Q., Feng, Y. (2016). Diversified mcr-1 harbouring plasmid reservoirs confer resistance to colistin in human gut microbiota. mBio, 7(2), e00177-16. https://doi.org/10.1128/mBio.00177-16
  • Yin, W., Li, H., Shen, Y., Liu, Z., Wang, S., Shen, Z., Wang, Y. (2017). Novel plasmid-mediated colistin resistance gene mcr-3 in Escherichia coli. mBio, 8(3), e00543-17. https://doi.org/10.1128/mBio.00543-17 Zeng, K-J., Doi, Y., Pati,l S., Huang, X., Tian, G-B. (2016). Emergence of the plasmid-mediated mcr-1 gene in colistin-resistant Enterobacter aerogenes and Enterobacter cloacae. Antimicrobial Agents Chemotherapy, 60, 3862-3863. https://doi.org/10.1128/AAC.00345-16
  • Zurfuh, K., Poirel, L., Nordmann, P. (2016). Occurrence of the plasmid-borne mcr-1 colistin resistance gene in ESBL-producing Enterobacteriaceae in river water and imported vegetable samples in Switzerland. Antimicrobial Agents and Chemotherapy, 60(4), 2594-2595. https://doi.org/10.1128/AAC.00066-16
There are 47 citations in total.

Details

Primary Language English
Subjects Food Engineering
Journal Section Research Articles
Authors

Mustafa Guzel 0000-0002-4750-7488

M. Dilek Avsaroglu

Yeşim Soyer 0000-0001-9687-9715

Publication Date May 16, 2020
Submission Date November 15, 2019
Published in Issue Year 2020Volume: 6 Issue: 3

Cite

APA Guzel, M., Avsaroglu, M. D., & Soyer, Y. (2020). Determination of colistin resistance in Escherichia coli isolates from foods in Turkey, 2011-2015. Food and Health, 6(3), 160-169.
 Download Cover Image

16339

Journal is licensed under a

CreativeCommons Attribtion-ShareAlike 4.0 International Licence  14627 1331027042
Diamond Open Access refers to a scholarly publication model in which journals and platforms do not charge fees to either authors or readers.

Open Access Statement:

This is an open access journal which means that all content is freely available without charge to the user or his/her institution. Users are allowed to read, download, copy, distribute, print, search, or link to the full texts of the articles, or use them for any other lawful purpose, without asking prior permission from the publisher or the author. This is in accordance with the BOAI definition of open access.

Archiving Policy:

27222

Archiving is done according to ULAKBİM "DergiPark" publication policy (LOCKSS).