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Year 2020, Volume 6, Issue 3, 160 - 169, 16.05.2020

Abstract

References

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  • Borowiak, M., Fischer, J., Hammer, J.A., Hendriksen, R.S., Szabo, I., Malorny, B. (2017). Identification of a novel transposon-associated phosphoethanolamine transferase gene, mcr-5, conferring colistin resistance in d-tartrate fermenting Salmonella enterica subsp. enterica serovar Paratyphi B. Journal of Antimicrobial Chemotherapy, 72(12), 3317-3324. https://doi.org/10.1093/jac/dkx327
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  • Doumith, M., Godbole, G.A., Philip, L., Lesley, D., Tim, D., Martin, D., Michaela, M-P., Berit, E., Matthew, J de P, Elizabeth, J., Alan, P.H., Katie, L.W. (2016). Detection of the plasmid-mediated mcr-1 gene conferring colistin resistance in human and food isolates of Salmonella enterica and Escherichia coli in England and Wales. Journal of Antimicrobial Chemotherapy, 71(8), 2300-2305. https://doi.org/10.1093/jac/dkw093
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  • European Committee on Antimicrobial Susceptibility Testing (EUCAST) (2016). Recomendations for MIC determination colistin (polymixin E) Eucast.org, http://www.eucast.org/fileadmin/src/media/PDFs/EUCAST_files/General_documents/Recommendations_for_MIC_determination_of_colistin_March_2016.pdf (accessed 29 March 2016).
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  • Fernandes, M.R., McCulloch, J.A., Vianello, M.A., Moura, Q., Pérez-Chaparro, P.J., Esposito, F., Lincopan, N. (2016). First report of the globally disseminated IncX4 plasmid carrying the mcr-1 gene in a colistin-resistant Escherichia coli sequence type 101 isolate from a human infection in Brazil. Antimicrobial Agents and Chemotherapy, 60, 6415-6417. https://doi.org/10.1128/AAC.01325-16
  • García, V., García-Meniño, I., Mora, A., Flament-Simon, S.C., Díaz-Jiménez, D., Blanco, J.E., Blanco, J. (2018). Co-occurrence of mcr-1, mcr-4 and mcr-5 genes in multidrug-resistant ST10 Enterotoxigenic and Shiga toxin-producing Escherichia coli in Spain (2006-2017). International Journal of Antimicrobial Agents, 52(1), 104-108. https://doi.org/10.1016/j.ijantimicag.2018.03.022
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Determination of colistin resistance in Escherichia coli isolates from foods in Turkey, 2011-2015

Year 2020, Volume 6, Issue 3, 160 - 169, 16.05.2020

Abstract

Antimicrobial resistance of pathogenic microorganisms is an emerging public health concern. Intensive use of antibiotics in food animals might increase antimicrobial resistance in foodborne pathogens. Colistin is a last resort antibiotic for treatment of multidrug resistant (MDR) Gram negative pathogens. The recent antimicrobial resistance studies revealed a mobile antimicrobial resistance gene (mcr) that provides resistance to colistin. Furthermore, the gene has been found in different genera. Therefore, the aim of this study was to determine colistin resistance of Escherichia coli isolates (N=48) isolated in between 2011 and 2015 from food samples in Turkey. In addition, 5 mcr genes and their variants were screened by performing PCR on resistant isolates. 4 E. coli isolates were found resistant to colistin above the epidemiological cut-off value (Minimum inhibitory concentration (MIC) > 2mg/L). None of the resistant isolates had the mcr genes. Further studies with human and food isolates should be conducted to figure out which gene or genes are responsible for colistin resistance.

References

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  • Borowiak, M., Fischer, J., Hammer, J.A., Hendriksen, R.S., Szabo, I., Malorny, B. (2017). Identification of a novel transposon-associated phosphoethanolamine transferase gene, mcr-5, conferring colistin resistance in d-tartrate fermenting Salmonella enterica subsp. enterica serovar Paratyphi B. Journal of Antimicrobial Chemotherapy, 72(12), 3317-3324. https://doi.org/10.1093/jac/dkx327
  • Carattoli, A., Villa, L., Feudi, C., Curcio, L., Orsini, S., Luppi, A., Pezzotti, G., Magistrali, C.F. (2017). Novel plasmid-mediated colistin resistance mcr-4 gene in Salmonella and Escherichia coli, Italy 2013, Spain and Belgium, 2015 to 2016. Eurosurveillance, 22(31), 30589. https://doi.org/10.2807/1560-7917.ES.2017.22.31.30589
  • Carroll, L.M., Gaballa, A., Guldimann, C., Sullivan, G., Henderson, L.O., Wiedmann, M. (2019). Identification of novel mobilized colistin resistance gene mcr-9 in a multidrug-resistant, colistin-susceptible Salmonella enterica serotype Typhimurium isolate. mBio, 10(3), e00853-19. https://doi.org/10.1128/mBio.00853-19
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  • Chen, K., Chan, E.W.C., Xe, M,. Ye, L., Dong, N., Chen, S. (2017). Widespread distribution of mcr-1-bearing bacteria in the ecosystem, 2015 to 2016. Eurosurveillance, 22(39), 17-00206. https://doi.org/10.2807/1560-7917.ES.2017.22.39.17-00206
  • Clinical and Laboratory Standards Institute (CLSI) (2014). Performance standards for antimicrobial susceptibility testing; Twenty-fourth informational supplement. CLSI document M100-S24. Clinical and Laboratory Standards Institute Wayne, PA.
  • Cui, M., Zhang, J., Zhang, C., Li, R., Chan, E.W., Wu, C., Wu, C., Chen, S. (2017). Distinct mechanisms of acquisition of mcr-1 -bearing plasmid by Salmonella strains recovered from animals and food samples. Scientific Reports, 7, 13199. https://doi.org/10.1038/s41598-017-01810-4
  • Doumith, M., Godbole, G.A., Philip, L., Lesley, D., Tim, D., Martin, D., Michaela, M-P., Berit, E., Matthew, J de P, Elizabeth, J., Alan, P.H., Katie, L.W. (2016). Detection of the plasmid-mediated mcr-1 gene conferring colistin resistance in human and food isolates of Salmonella enterica and Escherichia coli in England and Wales. Journal of Antimicrobial Chemotherapy, 71(8), 2300-2305. https://doi.org/10.1093/jac/dkw093
  • El Garch, F., Sauget, M., Hocquet, D., LeChaudee, D., Woehrle, F., Bertrand, X. (2017). mcr-1is borne by highly diverse Escherichia coli isolates since 2004 in food-producing animals in Europe. Clinical Microbiology and Infection, 23(1), 51.e1-51.e4. https://doi.org/10.1016/j.cmi.2016.08.033
  • European Committee on Antimicrobial Susceptibility Testing (EUCAST) (2016). Recomendations for MIC determination colistin (polymixin E) Eucast.org, http://www.eucast.org/fileadmin/src/media/PDFs/EUCAST_files/General_documents/Recommendations_for_MIC_determination_of_colistin_March_2016.pdf (accessed 29 March 2016).
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  • Feng, P., Weagant, S.D., Jinneman, K. (2011). BAM: diarrheagenic Escherichia coli. Silver Spring (MD), United States Food and Drug Administration. https://www.fda.gov/food/laboratory-methods-food/bam-diarrheagenic-escherichia-coli (accessed 11/21/2018).
  • Fernandes, M.R., McCulloch, J.A., Vianello, M.A., Moura, Q., Pérez-Chaparro, P.J., Esposito, F., Lincopan, N. (2016). First report of the globally disseminated IncX4 plasmid carrying the mcr-1 gene in a colistin-resistant Escherichia coli sequence type 101 isolate from a human infection in Brazil. Antimicrobial Agents and Chemotherapy, 60, 6415-6417. https://doi.org/10.1128/AAC.01325-16
  • García, V., García-Meniño, I., Mora, A., Flament-Simon, S.C., Díaz-Jiménez, D., Blanco, J.E., Blanco, J. (2018). Co-occurrence of mcr-1, mcr-4 and mcr-5 genes in multidrug-resistant ST10 Enterotoxigenic and Shiga toxin-producing Escherichia coli in Spain (2006-2017). International Journal of Antimicrobial Agents, 52(1), 104-108. https://doi.org/10.1016/j.ijantimicag.2018.03.022
  • Hasman, H., Hammerum, A.M., Hansen, F., Hendriksen, R.S., Olesen, B., Agerso, Y., Zankari, E., Leekitchharoenphon, P., Stegger, M., Kaas, R.S., Cavaco, L.M., Hansen D.S., Aarestrup, F.M., Skov, R.L. (2015). Detection of mcr-1 encoding plasmid mediated colistin resistant Escherischia coli isolates from human bloodstream infection and imported chicken meat, Denmark 2015. Eurosurveillance, 20(49), 1-5. https://doi.org/10.2807/1560-7917.ES.2015.20.49.30085
  • Hernández, M., Iglesias, M.R., Rodríguez-Lázaro, D., Gallardo, A., Quijada, N.M., Miguela-Villoldo, P., Campos, M.J., Píriz, S., López-Orozco, G., de Frutos, C,, Sáez, J.L., Ugarte-Ruiz, M., Domínguez, L., Quesada, A. (2017). Co-occurrence of colistin-resistance genes mcr-1 and mcr-3 among multidrug-resistant Escherichia coli isolated from cattle, Spain, September 2015. Eurosurveillance, 22(31), pii=30586. https://doi.org/10.2807/1560-7917.ES.2017.22.31.30586
  • Hu, Y., Liu, F., Lin, I.Y.C., Gao, G.F., Zhu, B. (2016). Dissemination of the mcr-1 colistin resistance gene. The Lancet Infectious Diseases, 16(2), 146-147. https://doi.org/10.1016/S1473-3099(15)00533-2
  • Kyere, E.O, Bulut, E., Avşaroğlu, M.D., Soyer, Y. (2015). Molecular evaluation and antimicrobial susceptibility testing of Escherichia coli isolates from food products in Turkey. Food Science and Biotechnology, 24(3), 1001-1009. https://doi.org/10.1007/s10068-015-0128-6
  • Li, A., Yang, Y., Miao, M., Chavda, K.D., Xie, X., Feng, P., Tang, Y. (2016). Complete sequences of mcr-1-Harboring plasmids from extended spectrum b-lactamase and carbapenemase producing Enterobacteriaceae. Antimicrobial Agents and Chemotherapy, 60(7), 4351-4354. https://doi.org/10.1128/AAC.00550-16
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Details

Primary Language English
Subjects Food Science and Technology
Journal Section Research Articles
Authors

Mustafa GUZEL This is me
Hitit University, Faculty of Engineering, Department of Food Engineering
0000-0002-4750-7488
Türkiye


M. Dilek AVSAROGLU This is me
Ahi Evran University, Faculty of Agriculture, Department of Agricultural Biotechnology
0000-0002-3106-9206
Türkiye


Yeşim SOYER (Primary Author)
Middle East Technical University, Faculty of Engineering, Department of Food Engineering
0000-0001-9687-9715
Türkiye

Publication Date May 16, 2020
Application Date November 15, 2019
Acceptance Date March 7, 2020
Published in Issue Year 2020, Volume 6, Issue 3

Cite

Bibtex @research article { jfhs647371, journal = {Food and Health}, issn = {}, eissn = {2602-2834}, address = {Vidin Caddesi No:28 D:4 Kocamustafapaşa 34107 Fatih İstanbul}, publisher = {Özkan ÖZDEN}, year = {2020}, volume = {6}, pages = {160 - 169}, doi = {}, title = {Determination of colistin resistance in Escherichia coli isolates from foods in Turkey, 2011-2015}, key = {cite}, author = {Guzel, Mustafa and Avsaroglu, M. Dilek and Soyer, Yeşim} }
APA Guzel, M. , Avsaroglu, M. D. & Soyer, Y. (2020). Determination of colistin resistance in Escherichia coli isolates from foods in Turkey, 2011-2015 . Food and Health , 6 (3) , 160-169 . Retrieved from https://jfhs.scientificwebjournals.com/en/pub/issue/53118/647371
MLA Guzel, M. , Avsaroglu, M. D. , Soyer, Y. "Determination of colistin resistance in Escherichia coli isolates from foods in Turkey, 2011-2015" . Food and Health 6 (2020 ): 160-169 <https://jfhs.scientificwebjournals.com/en/pub/issue/53118/647371>
Chicago Guzel, M. , Avsaroglu, M. D. , Soyer, Y. "Determination of colistin resistance in Escherichia coli isolates from foods in Turkey, 2011-2015". Food and Health 6 (2020 ): 160-169
RIS TY - JOUR T1 - Determination of colistin resistance in Escherichia coli isolates from foods in Turkey, 2011-2015 AU - Mustafa Guzel , M. Dilek Avsaroglu , Yeşim Soyer Y1 - 2020 PY - 2020 N1 - DO - T2 - Food and Health JF - Journal JO - JOR SP - 160 EP - 169 VL - 6 IS - 3 SN - -2602-2834 M3 - UR - Y2 - 2020 ER -
EndNote %0 Food and Health Determination of colistin resistance in Escherichia coli isolates from foods in Turkey, 2011-2015 %A Mustafa Guzel , M. Dilek Avsaroglu , Yeşim Soyer %T Determination of colistin resistance in Escherichia coli isolates from foods in Turkey, 2011-2015 %D 2020 %J Food and Health %P -2602-2834 %V 6 %N 3 %R %U
ISNAD Guzel, Mustafa , Avsaroglu, M. Dilek , Soyer, Yeşim . "Determination of colistin resistance in Escherichia coli isolates from foods in Turkey, 2011-2015". Food and Health 6 / 3 (May 2020): 160-169 .
AMA Guzel M. , Avsaroglu M. D. , Soyer Y. Determination of colistin resistance in Escherichia coli isolates from foods in Turkey, 2011-2015. Food Health. 2020; 6(3): 160-169.
Vancouver Guzel M. , Avsaroglu M. D. , Soyer Y. Determination of colistin resistance in Escherichia coli isolates from foods in Turkey, 2011-2015. Food and Health. 2020; 6(3): 160-169.
IEEE M. Guzel , M. D. Avsaroglu and Y. Soyer , "Determination of colistin resistance in Escherichia coli isolates from foods in Turkey, 2011-2015", Food and Health, vol. 6, no. 3, pp. 160-169, May. 2020

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