Research Article
BibTex RIS Cite

Molecular and taxonomic studies on some Acarospora (Acarosporales, Ascomycota) species in Türkiye

Year 2023, Volume: 16 Issue: 2, 84 - 97, 15.08.2023

Dr. Mithat Güllü Mehmet Gökhan Halıcı Fatma Öztürk Küp

https://doi.org/10.46309/biodicon.2023.1197860

Abstract

Acarospora is a crustose lichen genus in the family Acarosporaceae and has a wide distribution. While the lichen genus Acarospora has more than 200 species in the world, the number of species so far determined in Türkiye is 41. Here we report three Acarospora species: A. irregularis H. Magn., A. rosulata (Th. Fr.) H. Magn., A. thamnina (Tuck.) Herre and two lichenicolous fungal species: Lichenostigma svandae Vondrák & Šoun, Stigmidium fuscatae (Arnold) R. Sant. new to Türkiye. Detailed information on these 5 taxa is provided along with photographs. The nrITS, β tubulin and mtSSU gene regions of the new Acarospora records are studied and their phylogenetical positions are discussed.

Keywords

Türkiye biodiversity lichenized fungi ITS gene region Acarospora.

Supporting Institution

Erciyes Üniversity

Project Number

FDK-2015-5927

Thanks

This study was supported by the Fund of Erciyes University Scientific research Project (Project no: FDK-2015-5927).

References

  • [1] Temina, M. & Nevo, E. (2009). Lichens of Israel: diversity, ecology, and distribution. BioRisk, 3, 127-136.
  • [2] John, V., Türk, A. (2017). Türkiye likenleri listesi. Nezahat Gökyiğit Botanik Bahçesi Yayını.
  • [3] Halıcı, M.G., Hawksworth, D. & Aksoy, A. (2007). Contributions to the lichenized and lichenicolous fungal biota of Turkey. Mycotaxon, 102.
  • [4] Türk, A., Halıcı, M. G., Candan, M., Yavuz, Y. (2015). The lichenized fungus genus Peltigera in Turkey. Biological Diversity and Conservation 8(2), 146-156.
  • [5] Aras, S. & Duman, D.C. (2006). Isolation of DNA for sequence analysis from herbarium material of some lichen specimens. Turkish Journal of Botany, 30(6), 449-453.
  • [6] Halıcı, M.G., Vondrák, J., Demirel, R., Ceylan, A. & Candan, M. (2014). Teloschistaceae (lichenized ascomycetes) in Turkey II.-Some poorly known taxa. Supported by molecular data. Nova Hedwigia, 98.
  • [7] Barak, M.Ü., Halıcı, M.G. & Güllü, M. (2016). Identification of some lichenized fungi species of Erciyes Mountain Kayseri/Turkey by using ITS rDNA marker. Biyolojik Çeşitlilik ve Koruma, 9(2), 84-95.
  • [8] Vondrak, J., Halıcı, M. G., Güllü, M. & Demirel, R. (2016). Taxonomy of the genus Athallia and its diversity in Turkey. Turkish Journal of Botany, 40(3), 319-328.
  • [9] White, T., Bruns, T., Lee, S. & Taylor, J. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: a guide to methods and applications, 18(1), 315-322.
  • [10] Gardes, M. & Bruns, T. D. (1993). ITS primers with enhanced specificity for basidiomycetes‐application to the identification of mycorrhizae and rusts. Molecular ecology, 2(2), 113-118.
  • [11] Hall, TA. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acids Symposium Series, 41: 95-98.
  • [12] Tamura, K., Stecher, G., Peterson, D., Filipski, A. & Kumar, S. (2013). MEGA6: molecular evolutionary genetics analysis version 6.0. Molecular biology and evolution, 30(12), 2725-2729.
  • [13] Knudsen, K., Kocourková, J. & Nordin, A. (2014). Conspicuous similarity hides diversity in the Acarospora badiofusca group (Acarosporaceae). The Bryologist, 117(4), 319-328.
  • [14] Brinker, S. R. & Knudsen, K. (2019). The first confirmed report of Acarospora bullata from North America. Opuscula Philolichenum, 18, 11-16.
  • [15] Westberg, M., Timdal, E., Asplund, J., Bendiksby, M., Haugan, R., Jonsson, F., … Millanes, A. (2015). New records of lichenized and lichenicolous fungi in Scandinavia. MycoKeys, 11, 33-61.
  • [16] Vondrak, J. & Jaroslav, Š.O.U.N. (2007). Lichenostigma svandae, a new lichenicolous fungus on Acarospora cervina. Lichenologist, 39(3), 211-216.
  • [17] Calatayud, V., Navarro-Rosinés, P. & Hafellner, J. (2002). A synopsis of Lichenostigma subgen. Lichenogramma (Arthoniales), with a key to the species. Mycological Research, 106(10), 1230-1242.
  • [18] Halıcı, M. G., Aksoy, A. (2009). Lichenised and Lichenicolous Fungi of Aladağlar National Park (Niğde, Kayseri and Adana Provinces) in Turkey. Turkish Journal of Botany. 33/3. 169-189.
  • [19] Triebel, D and Cáceres, M. (2004). Stigmidium. – In: Nash, T. H. III, Ryan, B. D., Diederich, P., Gries, C. & Bungartz, F. (eds). Lichen Flora of the Greater Sonoran Desert Region 2: 703–707. – Tempe, Arizona: Lichens Unlimited, Arizona State University.
  • [20] Hafellner, J., D. Triebel, B.D. Ryan and T.H. Nash III. (2002). On lichenicolous fungi from North America. II. Mycotaxon 84: 293–329.
  • [21] Kocourková, J. & Knudsen, K. (2018). Stigmidium rouxianum (Mycosphaerellaceae, Dothideomycetes), reported new for North America and California. Opuscula Philolichenum, 17, 293-298.

Türkiye'deki bazı Acarospora (Acarosporales, Ascomycota) türleri üzerinde moleküler ve taksonomik çalışmalar

Year 2023, Volume: 16 Issue: 2, 84 - 97, 15.08.2023

Dr. Mithat Güllü Mehmet Gökhan Halıcı Fatma Öztürk Küp

https://doi.org/10.46309/biodicon.2023.1197860

Abstract

Acarospora, Acarosporaceae familyasında yer alan kabuksu bir liken cinsi olup, dünya üzerinde geniş bir yayılış alanına sahiptir. Acarospora cinsi içerisinde dünyada 200'den fazla tür bulunurken, Türkiye'de şu ana kadar tespit edilen tür sayısı 41'dir. Bu çalışma, Türkiye liken florası için üç likenleşmiş mantar ve iki likenikol mantar türü yeni kayıt olarak sunulmaktadır: Acarospora irregularis H. Magn., Acarospora rosulata (Th. Fr.) H. Magn., Acarospora thamnina (Tuck.) Herre, Lichenostigma svandae Vondrák & Šoun, Stigmidium fuscatae (Arnold) R. Sant. Bu 5 takson hakkında detaylı bilgiler fotoğraflarla birlikte verilmektedir. Yeni kayıtların nrITS, β tubulin ve mtSSU gen bölgeleri çalışılmış ve türlerin filogenetik konumu Acarospora cinsinde yer almış ve cinsin diğer türlerinden net olarak ayrılmıştır.

Keywords

Türkiye biyoçeşitlilik likenleşmiş mantarlar ITS gen bölgesi Acarospora

Project Number

FDK-2015-5927

References

  • [1] Temina, M. & Nevo, E. (2009). Lichens of Israel: diversity, ecology, and distribution. BioRisk, 3, 127-136.
  • [2] John, V., Türk, A. (2017). Türkiye likenleri listesi. Nezahat Gökyiğit Botanik Bahçesi Yayını.
  • [3] Halıcı, M.G., Hawksworth, D. & Aksoy, A. (2007). Contributions to the lichenized and lichenicolous fungal biota of Turkey. Mycotaxon, 102.
  • [4] Türk, A., Halıcı, M. G., Candan, M., Yavuz, Y. (2015). The lichenized fungus genus Peltigera in Turkey. Biological Diversity and Conservation 8(2), 146-156.
  • [5] Aras, S. & Duman, D.C. (2006). Isolation of DNA for sequence analysis from herbarium material of some lichen specimens. Turkish Journal of Botany, 30(6), 449-453.
  • [6] Halıcı, M.G., Vondrák, J., Demirel, R., Ceylan, A. & Candan, M. (2014). Teloschistaceae (lichenized ascomycetes) in Turkey II.-Some poorly known taxa. Supported by molecular data. Nova Hedwigia, 98.
  • [7] Barak, M.Ü., Halıcı, M.G. & Güllü, M. (2016). Identification of some lichenized fungi species of Erciyes Mountain Kayseri/Turkey by using ITS rDNA marker. Biyolojik Çeşitlilik ve Koruma, 9(2), 84-95.
  • [8] Vondrak, J., Halıcı, M. G., Güllü, M. & Demirel, R. (2016). Taxonomy of the genus Athallia and its diversity in Turkey. Turkish Journal of Botany, 40(3), 319-328.
  • [9] White, T., Bruns, T., Lee, S. & Taylor, J. (1990). Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: a guide to methods and applications, 18(1), 315-322.
  • [10] Gardes, M. & Bruns, T. D. (1993). ITS primers with enhanced specificity for basidiomycetes‐application to the identification of mycorrhizae and rusts. Molecular ecology, 2(2), 113-118.
  • [11] Hall, TA. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acids Symposium Series, 41: 95-98.
  • [12] Tamura, K., Stecher, G., Peterson, D., Filipski, A. & Kumar, S. (2013). MEGA6: molecular evolutionary genetics analysis version 6.0. Molecular biology and evolution, 30(12), 2725-2729.
  • [13] Knudsen, K., Kocourková, J. & Nordin, A. (2014). Conspicuous similarity hides diversity in the Acarospora badiofusca group (Acarosporaceae). The Bryologist, 117(4), 319-328.
  • [14] Brinker, S. R. & Knudsen, K. (2019). The first confirmed report of Acarospora bullata from North America. Opuscula Philolichenum, 18, 11-16.
  • [15] Westberg, M., Timdal, E., Asplund, J., Bendiksby, M., Haugan, R., Jonsson, F., … Millanes, A. (2015). New records of lichenized and lichenicolous fungi in Scandinavia. MycoKeys, 11, 33-61.
  • [16] Vondrak, J. & Jaroslav, Š.O.U.N. (2007). Lichenostigma svandae, a new lichenicolous fungus on Acarospora cervina. Lichenologist, 39(3), 211-216.
  • [17] Calatayud, V., Navarro-Rosinés, P. & Hafellner, J. (2002). A synopsis of Lichenostigma subgen. Lichenogramma (Arthoniales), with a key to the species. Mycological Research, 106(10), 1230-1242.
  • [18] Halıcı, M. G., Aksoy, A. (2009). Lichenised and Lichenicolous Fungi of Aladağlar National Park (Niğde, Kayseri and Adana Provinces) in Turkey. Turkish Journal of Botany. 33/3. 169-189.
  • [19] Triebel, D and Cáceres, M. (2004). Stigmidium. – In: Nash, T. H. III, Ryan, B. D., Diederich, P., Gries, C. & Bungartz, F. (eds). Lichen Flora of the Greater Sonoran Desert Region 2: 703–707. – Tempe, Arizona: Lichens Unlimited, Arizona State University.
  • [20] Hafellner, J., D. Triebel, B.D. Ryan and T.H. Nash III. (2002). On lichenicolous fungi from North America. II. Mycotaxon 84: 293–329.
  • [21] Kocourková, J. & Knudsen, K. (2018). Stigmidium rouxianum (Mycosphaerellaceae, Dothideomycetes), reported new for North America and California. Opuscula Philolichenum, 17, 293-298.
There are 21 citations in total.

Details

Primary Language English
Subjects Structural Biology
Journal Section Research Articles
Authors

Dr. Mithat Güllü 0000-0001-7100-9609

Mehmet Gökhan Halıcı 0000-0003-4797-1157

Fatma Öztürk Küp 0000-0002-4785-4017

Project Number FDK-2015-5927
Early Pub Date August 8, 2023
Publication Date August 15, 2023
Submission Date November 1, 2022
Acceptance Date February 28, 2023
Published in Issue Year 2023 Volume: 16 Issue: 2

Cite

APA Güllü, D. M., Halıcı, M. G., & Öztürk Küp, F. (2023). Molecular and taxonomic studies on some Acarospora (Acarosporales, Ascomycota) species in Türkiye. Biological Diversity and Conservation, 16(2), 84-97. https://doi.org/10.46309/biodicon.2023.1197860
 Download Cover Image

❖  Abstracted-Indexed in
Web of Science {Zoological Records Indexed] Clavariate Analytic, Medical Reads (RRS), CrossRef;10.46309/biodicon.

❖ Libraries
Aberystwyth University; All libraries; Bath University; Birmingham University; Cardiff University; City University London; CONSER (Not UK Holdings); Edinburgh University; Essex University; Exeter University; Eskişehir Technical University Library; EZB Electronic Journals Library; Feng Chia University Library; GAZİ Gazi University Library; Glasgow University; HEC-National Digital Library; Hull University; Imperial College London; Kaohsinug Medical University Library; ANKOS; Anadolu University Library; Lancaster University; Libros PDF; Liverpool University; London Metropolitan University; London School of Economics and Political Science; Manchester University; National Cheng Kung University Library; National ILAN University Library; Nottingham University; Open University; Oxford University; Queen Mary,University of London;Robert Gordon University; Royal Botanic Gardens, Kew; Sheffield Hallam University; Sheffield University; Shih Hsin University Library; Smithsonian Institution Libraries; Southampton University; Stirling University; Strathclyde University; Sussex University; The National Agricultural Library (NAL); The Ohio Library and Information NetWork; Trinity College Dublin; University of Washington Libraries; Vaughan Memorial Library; York University..

❖ The article processing is free.

❖ Web of Science-Clarivate Analytics, Zoological Record
❖ This journal is a CrossRef;10.46309/biodicon. member

❖ Please visit ” http:// www.biodicon.com“ ; "https://dergipark.org.tr/en/pub/biodicon"   for instructions about articles and all of the details about journal


❖  Correspondance Adres: Prof. Ersin YÜCEL, Sazova Mahallesi, Ziraat Caddesi, No.277 F Blok, 26005 Tepebaşı-Eskişehir/Türkiye
❖ E-posta / E-mail: biodicon@gmail.com;
❖ Web Address: http://www.biodicon.com;   https://dergipark.org.tr/en/pub/biodicon
❖ Biological Diversity and Conservation/ Biyolojik Çeşitlilik ve Koruma
❖ ISSN 1308-5301 Print; ISSN 1308-8084 Online
❖ Start Date Published 2008
❖ © Copyright by Biological Diversity and Conservation/Biyolojik Çeşitlilik ve Koruma-Available online at www.biodicon.com/All rights reserved
❖ Publisher : ERSİN YÜCEL (https://www.ersinyucel.com.tr/)
❖ This journal is published three numbers in a year. Printed in Eskişehir/Türkiye.
❖ All sorts of responsibilities of the articles published in this journal are belonging to the authors
❖ Editör / Editor-In-Chief : Prof.Dr. Ersin YÜCEL, https://orcid.org/0000-0001-8274-7578